Banner

Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs7702800 chr5:56271610 C/T C5orf35 chr5:56205103-56213010:+ 1.06 5.61 7.91E-7 Box Plot
ACC rs7702837 chr5:112692738 T/G APC chr5:112043195-112181936:+ 0.72 5.27 2.68E-6 Box Plot
ACC rs7703341 chr5:96290230 G/A ERAP2 chr5:96211643-96255420:+ 0.95 10.88 5.25E-15 Box Plot
ACC rs7705093 chr5:96290647 C/T ERAP2 chr5:96211643-96255420:+ 0.96 10.53 1.7E-14 Box Plot
ACC rs7713127 chr5:96288138 A/G ERAP2 chr5:96211643-96255420:+ 0.87 9.38 9.13E-13 Box Plot
ACC rs7716222 chr5:96293006 C/A ERAP2 chr5:96211643-96255420:+ 0.95 10.88 5.25E-15 Box Plot
ACC rs77182701 chr11:74557685 TTAATA/T XRRA1 chr11:74518784-74660245:- 0.74 5.73 5.15E-7 Box Plot
ACC rs7722694 chr5:96319491 T/C ERAP2 chr5:96211643-96255420:+ 0.82 8.52 1.97E-11 Box Plot
ACC rs7722803 chr5:56272033 A/G C5orf35 chr5:56205103-56213010:+ 1.06 5.61 7.91E-7 Box Plot
ACC rs7726445 chr5:96281043 A/T ERAP2 chr5:96211643-96255420:+ 0.95 10.88 5.25E-15 Box Plot
ACC rs7731592 chr5:96288960 G/A ERAP2 chr5:96211643-96255420:+ 0.95 10.88 5.25E-15 Box Plot
ACC rs7733312 chr5:96285821 C/G ERAP2 chr5:96211643-96255420:+ 0.94 11.24 1.6E-15 Box Plot
ACC rs7736466 chr5:96289711 C/G ERAP2 chr5:96211643-96255420:+ 0.88 9.66 3.43E-13 Box Plot
ACC rs7736675 chr5:56273400 A/G C5orf35 chr5:56205103-56213010:+ 0.95 5.14 4.22E-6 Box Plot
ACC rs7741515 chr6:135374368 C/G ALDH8A1 chr6:135238528-135271260:- 0.56 5.09 5.04E-6 Box Plot